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Intron Name: Anas_platyrhynchos_platyrhynchos_12_4945241_4965241_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4945241 - 4965241

Intron Length:

20001

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGCCGC

5'SS Class:

major

3'SS Sequence:

ACTCTGTTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATCAC

U12 Branch Point Sequence:

GTATTATCACTC

Flanking Amino Acid:

FPYLCYKNGGGAFLIPYILF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.7

0.63

1.1

47.1

Major BPS

78.3

0.7

32.1

Major PPT

78.4

0.64

0.9

41.3

Minor 5ss

37.8

-1.4

42.7

44.3

Minor BPS

43.3

-0.5

1.9

53.08

38.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003879

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004101

4901070 - 4965524

64455