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Intron Name: Anas_platyrhynchos_platyrhynchos_12_4989491_4991297_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4989491 - 4991297

Intron Length:

1807

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

ACATCTTTTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAA

U12 Branch Point Sequence:

ATTTCTACACCT

Flanking Amino Acid:

TEETIQMAFKLFDLDEDGTI

Intron Amino Acid Position:

390

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.3

1.09

0.7

86.7

23.1

Major BPS

70.1

0.5

1.1

69.9

35.3

Major PPT

78.3

0.64

0.9

69.4

40.9

Minor 5ss

40.5

-1.1

2.7

50.7

45.7

Minor BPS

48.8

-0

75.59

41.1

Associated Gene:

Gene:

LPCAT2

Ensembl Gene ID:

ENSAPLG00000003809

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018603

4988846 - 5016851

28006

ENSAPLT00000003960

4988846 - 5013172

24327