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Intron Name: Anas_platyrhynchos_platyrhynchos_12_4991397_4998073_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4991397 - 4998073

Intron Length:

6677

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

ATTTTGGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATATAT

U12 Branch Point Sequence:

TTAGCCATAACT

Flanking Amino Acid:

LRELFHLFDRNGDGTIDFRE

Intron Amino Acid Position:

357

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.79

0.9

77.8

38.7

Major BPS

71.4

0.53

67.3

39.3

Major PPT

80.7

0.69

77.4

41.2

Minor 5ss

31.6

-2.1

2.7

34.1

41.4

Minor BPS

68.8

0.67

1.7

86.11

39.5

Associated Gene:

Gene:

LPCAT2

Ensembl Gene ID:

ENSAPLG00000003809

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018603

4988846 - 5016851

28006

ENSAPLT00000003960

4988846 - 5013172

24327