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Intron Name: Anas_platyrhynchos_platyrhynchos_12_4999054_4999594_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4999054 - 4999594

Intron Length:

541

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTATGTAAC

5'SS Class:

major

3'SS Sequence:

ATTTGTTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TTTTCCTTAATT

Flanking Amino Acid:

FANRVRQTMATALNVPVTDH

Intron Amino Acid Position:

263

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.3

36.6

Major BPS

0.92

0.9

86.2

29.1

Major PPT

87.6

0.84

0.8

85.1

34.9

Minor 5ss

43.5

-0.7

2.5

37.5

Minor BPS

95.9

1.52

0.5

104

16.3

Associated Gene:

Gene:

LPCAT2

Ensembl Gene ID:

ENSAPLG00000003809

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018603

4988846 - 5016851

28006

ENSAPLT00000003960

4988846 - 5013172

24327