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Intron Name: Anas_platyrhynchos_platyrhynchos_12_4999678_5002770_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4999678 - 5002770

Intron Length:

3093

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAATT

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTCTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TGACTCTTAATT

Flanking Amino Acid:

CQLFTRVEVEFLPVHVPTEE

Intron Amino Acid Position:

236

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.06

0.7

93.7

19.9

Major BPS

0.92

0.9

86.2

29.1

Major PPT

89.4

0.89

0.6

87.9

22.1

Minor 5ss

39.4

-1.2

3.1

57.6

46.6

Minor BPS

70.9

0.73

1.2

78.98

36.8

Associated Gene:

Gene:

LPCAT2

Ensembl Gene ID:

ENSAPLG00000003809

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018603

4988846 - 5016851

28006

ENSAPLT00000003960

4988846 - 5013172

24327