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Intron Name: Anas_platyrhynchos_platyrhynchos_12_5002826_5004958_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5002826 - 5004958

Intron Length:

2133

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTAAGTTTC

5'SS Class:

major

3'SS Sequence:

TCTCCACCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

TCTTCTCCACCT

Flanking Amino Acid:

TVTWTWQGYSLKELFVMTMC

Intron Amino Acid Position:

217

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

32.4

Major BPS

73.1

0.58

79.6

29.1

Major PPT

77.2

0.61

0.8

70.3

29.4

Minor 5ss

47.3

-0.3

2.8

67.6

37.4

Minor BPS

47.7

-0

2.1

72.5

44.6

Associated Gene:

Gene:

LPCAT2

Ensembl Gene ID:

ENSAPLG00000003809

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018603

4988846 - 5016851

28006

ENSAPLT00000003960

4988846 - 5013172

24327