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Intron Name: Anas_platyrhynchos_platyrhynchos_12_5004994_5006274_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5004994 - 5006274

Intron Length:

1281

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCAGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTATCCTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTATTTTTATCC

Flanking Amino Acid:

PVLLRYPNKLDTVTWTWQGY

Intron Amino Acid Position:

206

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

70.7

41.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

82.7

0.74

0.7

82.4

28.3

Minor 5ss

38.9

-1.2

2.8

45.8

44.3

Minor BPS

65.6

0.47

1.5

74.42

36.4

Associated Gene:

Gene:

LPCAT2

Ensembl Gene ID:

ENSAPLG00000003809

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018603

4988846 - 5016851

28006

ENSAPLT00000003960

4988846 - 5013172

24327