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Intron Name: Anas_platyrhynchos_platyrhynchos_12_50049_56249_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

50049 - 56249

Intron Length:

6201

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAATACA

5'SS Class:

strong_major

3'SS Sequence:

CCATTCTTTTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAC

U12 Branch Point Sequence:

GATGTATTAACC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

83.1

28.6

Major BPS

81.9

0.79

0.8

81.9

Major PPT

71.3

0.48

74.9

33.5

Minor 5ss

35.4

-1.7

2.7

43.5

43.6

Minor BPS

56.3

0.18

1.7

65.28

39.9

Associated Gene:

Gene:

ANKRD27

Ensembl Gene ID:

ENSAPLG00000011807

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033866

49668 - 88364

38697

ENSAPLT00000040364

49996 - 88364

38369