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Intron Name: Anas_platyrhynchos_platyrhynchos_12_5006334_5007309_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5006334 - 5007309

Intron Length:

976

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGGTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAC

U12 Branch Point Sequence:

TCAGTCTTAACA

Flanking Amino Acid:

NRSCLITFKQGAFIPRVPVQ

Intron Amino Acid Position:

186

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

85.9

23.9

Major BPS

77.1

0.67

77.9

32.2

Major PPT

85.8

0.81

0.9

80.6

Minor 5ss

29.7

-2.3

39.4

46.1

Minor BPS

68.9

0.59

1.4

71.36

41.1

Associated Gene:

Gene:

LPCAT2

Ensembl Gene ID:

ENSAPLG00000003809

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018603

4988846 - 5016851

28006

ENSAPLT00000003960

4988846 - 5013172

24327