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Intron Name: Anas_platyrhynchos_platyrhynchos_12_5007371_5009679_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5007371 - 5009679

Intron Length:

2309

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATAAAG

5'SS Class:

strong_major

3'SS Sequence:

CTTTAAATCTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

TTCTCTTTAAAT

Flanking Amino Acid:

RALSGGKWPQILIFPEGTCT

Intron Amino Acid Position:

166

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

73.5

37.1

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

62.8

0.29

1.1

65.5

38.9

Minor 5ss

32.9

-2

2.9

45.6

Minor BPS

78.4

0.97

1.3

88.96

35.8

Associated Gene:

Gene:

LPCAT2

Ensembl Gene ID:

ENSAPLG00000003809

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018603

4988846 - 5016851

28006

ENSAPLT00000003960

4988846 - 5013172

24327