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Intron Name: Anas_platyrhynchos_platyrhynchos_12_5009793_5011037_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5009793 - 5011037

Intron Length:

1245

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

ATCTCTTTCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACAAAT

U12 Branch Point Sequence:

ATCTCTTTCACA

Flanking Amino Acid:

AENLSTPVFGTILSSLQPVA

Intron Amino Acid Position:

128

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

32.3

Major BPS

60.7

0.27

65.3

28.1

Major PPT

81.1

0.7

0.8

75.8

32.1

Minor 5ss

43.9

-0.7

2.9

66.1

38.6

Minor BPS

64.3

0.44

1.7

73.1

39.3

Associated Gene:

Gene:

LPCAT2

Ensembl Gene ID:

ENSAPLG00000003809

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018603

4988846 - 5016851

28006

ENSAPLT00000003960

4988846 - 5013172

24327