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Intron Name: Anas_platyrhynchos_platyrhynchos_12_5011256_5011782_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5011256 - 5011782

Intron Length:

527

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGCGT

5'SS Class:

major

3'SS Sequence:

TTCTGTTTACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTAAT

U12 Branch Point Sequence:

TTCTGTTTACCA

Flanking Amino Acid:

GGAVPLKGWRRRMIQTSLSC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

66.7

44.4

Major BPS

72.1

0.55

1.2

73.3

39.1

Major PPT

79.6

0.67

0.9

73.6

40.6

Minor 5ss

31.8

-2.1

3.5

47.7

47.8

Minor BPS

54.6

0.14

70.26

42.8

Associated Gene:

Gene:

LPCAT2

Ensembl Gene ID:

ENSAPLG00000003809

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018603

4988846 - 5016851

28006

ENSAPLT00000003960

4988846 - 5013172

24327