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Intron Name: Anas_platyrhynchos_platyrhynchos_12_5011923_5016743_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5011923 - 5016743

Intron Length:

4821

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGGCCG

5'SS Class:

major

3'SS Sequence:

CCTCTTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

TATTTCTTGAGA

Flanking Amino Acid:

GRLSAGDKLRTVLLGIILLP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.64

1.1

57.9

46.7

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

88.9

0.87

0.6

87.2

23.2

Minor 5ss

30.6

-2.2

3.2

31.8

42.1

Minor BPS

0.5

1.6

74.62

36.9

Associated Gene:

Gene:

LPCAT2

Ensembl Gene ID:

ENSAPLG00000003809

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018603

4988846 - 5016851

28006