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Intron Name: Anas_platyrhynchos_platyrhynchos_12_5048768_5050190_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5048768 - 5050190

Intron Length:

1423

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGAGGC

5'SS Class:

major

3'SS Sequence:

TTTACCATCCGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTTTAC

U12 Branch Point Sequence:

CTGCTTTTACCA

Flanking Amino Acid:

TYIFAGDRYWKSLPGTGLYS

Intron Amino Acid Position:

593

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

67.1

37.2

Major BPS

74.2

0.6

39.4

Major PPT

53.4

0.08

1.7

41.6

Minor 5ss

32.5

-2

3.4

Minor BPS

50.3

1.6

59.36

41.2

Associated Gene:

Gene:

MMP2

Ensembl Gene ID:

ENSAPLG00000003788

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014138

5048449 - 5080268

31820