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Intron Name: Anas_platyrhynchos_platyrhynchos_12_5052425_5057029_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5052425 - 5057029

Intron Length:

4605

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

GTGTTCTGCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAA

U12 Branch Point Sequence:

TTCATTGTAAAT

Flanking Amino Acid:

IRGETFFFKDRFMWRTVNPR

Intron Amino Acid Position:

494

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.8

1.06

0.7

81.4

32.7

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

71.1

0.48

69.3

41.7

Minor 5ss

-2.1

3.1

39.6

46.4

Minor BPS

47.5

-0.1

2.1

68.85

42.4

Associated Gene:

Gene:

MMP2

Ensembl Gene ID:

ENSAPLG00000003788

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014138

5048449 - 5080268

31820

ENSAPLT00000003873

5045156 - 5080268

35113