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Intron Name: Anas_platyrhynchos_platyrhynchos_12_5057184_5058619_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5057184 - 5058619

Intron Length:

1436

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGGCCT

5'SS Class:

major

3'SS Sequence:

TTCACCATTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAC

U12 Branch Point Sequence:

TTCACCATTACA

Flanking Amino Acid:

DDIKGIQELYEVSTDVEPGP

Intron Amino Acid Position:

443

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

67.4

43.6

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

76.6

0.6

0.9

69.4

35.4

Minor 5ss

33.9

-1.8

3.4

49.8

Minor BPS

52.5

0.07

69.5

42.1

Associated Gene:

Gene:

MMP2

Ensembl Gene ID:

ENSAPLG00000003788

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003873

5045156 - 5080268

35113

ENSAPLT00000014138

5048449 - 5080268

31820