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Intron Name: Anas_platyrhynchos_platyrhynchos_12_5068434_5070026_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5068434 - 5070026

Intron Length:

1593

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCAAAC

5'SS Class:

major

3'SS Sequence:

GTTCTCTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GACTAAT

U12 Branch Point Sequence:

ATTTCCCCATTG

Flanking Amino Acid:

DELWTLGEGQVVRVKYGNAD

Intron Amino Acid Position:

217

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.1

0.45

1.2

66.2

39.8

Major BPS

0.47

1.2

69.9

35.3

Major PPT

86.2

0.81

0.8

80.7

31.3

Minor 5ss

38.2

-1.3

3.1

51.9

44.8

Minor BPS

46.3

-0.4

2.1

59.01

42.8

Associated Gene:

Gene:

MMP2

Ensembl Gene ID:

ENSAPLG00000003788

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014138

5048449 - 5080268

31820

ENSAPLT00000003873

5045156 - 5080268

35113