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Intron Name: Anas_platyrhynchos_platyrhynchos_12_5070156_5072247_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5070156 - 5072247

Intron Length:

2092

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTATATTTT

5'SS Class:

weak_major

3'SS Sequence:

CTTTCTCCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTAGAA

U12 Branch Point Sequence:

ACTGCTTTATTT

Flanking Amino Acid:

ADIMINFGRWEHGDGYPFDG

Intron Amino Acid Position:

174

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.52

1.1

73.8

37.5

Major BPS

61.2

0.28

58.8

38.1

Major PPT

86.5

0.82

0.7

81.2

23.9

Minor 5ss

54.1

0.14

2.5

66.4

45.1

Minor BPS

54.9

0.23

1.7

69.31

42.7

Associated Gene:

Gene:

MMP2

Ensembl Gene ID:

ENSAPLG00000003788

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003873

5045156 - 5080268

35113

ENSAPLT00000014138

5048449 - 5080268

31820