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Intron Name: Anas_platyrhynchos_platyrhynchos_12_5155989_5156320_R

Intron Information:

Intron Rank:

139517

Intron Class:

major

Intron Phase:

Intron Coordinates:

5155989 - 5156320

Intron Length:

332

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTGAGTAGG

5'SS Class:

major

3'SS Sequence:

TTCCCATTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

TCTTTTTTAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.3

0.46

1.1

62.1

43.9

Major BPS

87.3

0.93

0.8

36.5

Major PPT

82.6

0.73

0.8

76.9

30.5

Minor 5ss

32.6

-2

2.8

43.3

43.7

Minor BPS

82.6

1.1

90.89

33.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022543

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048278

5152240 - 5156648

4409