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Intron Name: Anas_platyrhynchos_platyrhynchos_12_5459717_5461017_R

Intron Information:

Intron Rank:

144072

Intron Class:

major

Intron Phase:

Intron Coordinates:

5459717 - 5461017

Intron Length:

1301

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTATTTTAA

5'SS Class:

major

3'SS Sequence:

TCATGTTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTGAT

U12 Branch Point Sequence:

GTCTCTTCACCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.1

0.45

1.1

65.7

36.2

Major BPS

82.5

0.81

0.8

71.4

36.6

Major PPT

82.9

0.74

0.9

80.4

36.9

Minor 5ss

45.2

-0.5

2.5

49.1

47.1

Minor BPS

53.7

0.2

1.9

72.55

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024755

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040553

5458407 - 5461099

2693