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Intron Name: Anas_platyrhynchos_platyrhynchos_12_5554248_5561340_F

Intron Information:

Intron Rank:

148953

Intron Class:

major

Intron Phase:

Intron Coordinates:

5554248 - 5561340

Intron Length:

7093

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGCAGG

5'SS Class:

strong_major

3'SS Sequence:

CACTCTCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTTCAT

U12 Branch Point Sequence:

GCTTGCTCACTC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

65.4

Major BPS

69.6

0.49

1.3

73.6

41.8

Major PPT

0.65

0.8

72.7

31.6

Minor 5ss

38.9

-1.2

2.8

45.7

43.7

Minor BPS

44.4

-0.4

2.1

54.76

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030125

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022736

5552830 - 5562888

10059