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Intron Name: Anas_platyrhynchos_platyrhynchos_12_5561699_5562861_F

Intron Information:

Intron Rank:

148955

Intron Class:

major

Intron Phase:

Intron Coordinates:

5561699 - 5562861

Intron Length:

1163

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

CTTTATTTCTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

ATCTCTTTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

72.2

39.5

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

74.1

0.54

78.8

33.1

Minor 5ss

30.2

-2.3

2.6

28.5

Minor BPS

64.9

0.55

1.6

77.64

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030125

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045465

5560357 - 5563151

2795

ENSAPLT00000022736

5552830 - 5562888

10059