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Intron Name: Anas_platyrhynchos_platyrhynchos_12_5566463_5581037_F

Intron Information:

Intron Rank:

127715

Intron Class:

major

Intron Phase:

Intron Coordinates:

5566463 - 5581037

Intron Length:

14575

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTAAAA

5'SS Class:

major

3'SS Sequence:

CTTTGTTCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAA

U12 Branch Point Sequence:

CTTTGTTCAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.1

69.9

35.9

Major BPS

79.4

0.73

0.9

69.6

37.5

Major PPT

77.7

0.62

0.9

73.4

35.9

Minor 5ss

31.8

-2.1

3.1

40.4

45.3

Minor BPS

55.8

0.18

71.01

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018859

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023570

5564740 - 5581698

16959