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Intron Name: Anas_platyrhynchos_platyrhynchos_12_5572315_5581037_F

Intron Information:

Intron Rank:

127710

Intron Class:

major

Intron Phase:

Intron Coordinates:

5572315 - 5581037

Intron Length:

8723

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATTTAAA

5'SS Class:

major

3'SS Sequence:

CTTTGTTCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAA

U12 Branch Point Sequence:

CTTTGTTCAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.69

77.8

31.4

Major BPS

79.4

0.73

0.9

69.6

37.5

Major PPT

77.7

0.62

0.9

73.4

35.9

Minor 5ss

41.2

-1

2.5

45.5

Minor BPS

55.8

0.18

71.01

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018859

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045492

5571990 - 5581206

9217

ENSAPLT00000019670

5571949 - 5608635

36687

ENSAPLT00000018805

5571949 - 5603225

31277