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Intron Name: Anas_platyrhynchos_platyrhynchos_12_5581322_5608356_F

Intron Information:

Intron Rank:

127713

Intron Class:

major

Intron Phase:

Intron Coordinates:

5581322 - 5608356

Intron Length:

27035

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTGAT

5'SS Class:

strong_major

3'SS Sequence:

CATTTTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTGAA

U12 Branch Point Sequence:

CAATTCAGAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

77.5

32.9

Major BPS

65.6

0.39

0.9

55.4

32.7

Major PPT

88.9

0.88

0.7

84.3

30.2

Minor 5ss

27.5

-2.6

3.4

39.1

46.7

Minor BPS

49.9

0.07

1.8

67.88

42.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018859

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019670

5571949 - 5608635

36687