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Intron Name: Anas_platyrhynchos_platyrhynchos_12_5698236_5698948_F

Intron Information:

Intron Rank:

146593

Intron Class:

major

Intron Phase:

Intron Coordinates:

5698236 - 5698948

Intron Length:

713

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCTCT

5'SS Class:

strong_major

3'SS Sequence:

GAAATCTTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTATAT

U12 Branch Point Sequence:

ATTTCTTGTATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

77.5

33.5

Major BPS

64.1

0.35

1.2

45.5

Major PPT

65.5

0.35

57.4

42.7

Minor 5ss

-1

56.7

47.6

Minor BPS

55.3

0.16

1.7

70.26

36.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028978

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028924

5697595 - 5699403

1809