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Intron Name: Anas_platyrhynchos_platyrhynchos_12_5729743_5747158_F

Intron Information:

Intron Rank:

140735

Intron Class:

major

Intron Phase:

Intron Coordinates:

5729743 - 5747158

Intron Length:

17416

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTATA

5'SS Class:

major

3'SS Sequence:

TTCTTTCTGACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTCTTTCTGACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.65

1.1

80.4

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

82.3

0.73

0.9

79.8

32.3

Minor 5ss

42.2

-0.9

2.9

61.3

Minor BPS

56.6

0.2

1.6

70.09

36.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025767

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033193

5729367 - 5747834

18468