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Intron Name: Anas_platyrhynchos_platyrhynchos_12_5731459_5733753_F

Intron Information:

Intron Rank:

140743

Intron Class:

major

Intron Phase:

Intron Coordinates:

5731459 - 5733753

Intron Length:

2295

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGCTTTA

5'SS Class:

major

3'SS Sequence:

CTGCTTGCCTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

AGCTTTTTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

1.2

38.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

71.4

0.48

0.9

68.8

37.1

Minor 5ss

47.9

-0.2

2.9

66.7

44.7

Minor BPS

53.3

0.18

1.5

65.87

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025767

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043656

5729367 - 5748248

18882