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Intron Name: Anas_platyrhynchos_platyrhynchos_12_5747267_5759739_F

Intron Information:

Intron Rank:

140739

Intron Class:

major

Intron Phase:

Intron Coordinates:

5747267 - 5759739

Intron Length:

12473

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTTGC

5'SS Class:

strong_major

3'SS Sequence:

TTTGAATTCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TGTTTTTGAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.06

0.7

82.3

32.2

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

71.2

0.48

0.9

62.9

Minor 5ss

40.5

-1.1

2.8

44.2

Minor BPS

67.2

0.62

1.3

80.96

34.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025767

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037206

5746677 - 5759761

13085