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Intron Name: Anas_platyrhynchos_platyrhynchos_12_5759827_5761506_F

Intron Information:

Intron Rank:

140737

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5759827 - 5761506

Intron Length:

1680

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

CTCGGCATGTAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTGGAC

U12 Branch Point Sequence:

TTTGGACCAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

81.8

31.8

Major BPS

61.5

0.29

1.4

63.1

44.5

Major PPT

49.8

-0

1.2

52.8

40.7

Minor 5ss

34.8

-1.7

3.3

49.9

46.4

Minor BPS

42.2

-0.5

2.4

70.26

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025767

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034149

5759196 - 5764635

5440