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Intron Name: Anas_platyrhynchos_platyrhynchos_12_5803470_5804954_F

Intron Information:

Intron Rank:

144631

Intron Class:

major

Intron Phase:

Intron Coordinates:

5803470 - 5804954

Intron Length:

1485

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTATTTTTGGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TATTCATCATCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.83

1.2

90.9

28.7

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

82.3

0.73

80.8

36.6

Minor 5ss

37.1

-1.5

2.8

51.6

44.9

Minor BPS

53.8

0.2

2.1

79.26

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027936

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034173

5797687 - 5804983

7297