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Intron Name: Anas_platyrhynchos_platyrhynchos_12_5803470_5808943_F

Intron Information:

Intron Rank:

144629

Intron Class:

major

Intron Phase:

Intron Coordinates:

5803470 - 5808943

Intron Length:

5474

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTGATATTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

GCTCACTGAAGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.83

1.2

90.9

28.7

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

79.1

0.65

70.2

44.7

Minor 5ss

37.1

-1.5

2.8

51.6

44.9

Minor BPS

47.2

-0.1

1.9

64.41

45.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027936

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029301

5797687 - 5808960

11274