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Intron Name: Anas_platyrhynchos_platyrhynchos_12_5844354_5894476_R

Intron Information:

Intron Rank:

134442

Intron Class:

major

Intron Phase:

Intron Coordinates:

5844354 - 5894476

Intron Length:

50123

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

CATTTTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TGTGTCTTCATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.5

1.07

0.7

84.1

30.2

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

88.1

0.86

0.7

80.5

36.7

Minor 5ss

39.6

-1.2

2.8

49.9

46.3

Minor BPS

56.6

0.29

1.9

75.64

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019611

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028028

5826774 - 5900034

73261