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Intron Name: Anas_platyrhynchos_platyrhynchos_12_6062862_6192119_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6062862 - 6192119

Intron Length:

129258

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGACAT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTCTGCTTACTT

Flanking Amino Acid:

RQRLRKEWTARCQSEAAESL

Intron Amino Acid Position:

452

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.8

76.8

33.7

Major BPS

100

1.24

0.5

100

Major PPT

87.8

0.85

0.7

85.6

27.3

Minor 5ss

28.2

-2.5

3.1

38.3

46.6

Minor BPS

58.5

0.34

2.1

79.08

43.9

Associated Gene:

Gene:

FTO

Ensembl Gene ID:

ENSAPLG00000016324

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022550

6062720 - 6264570

201851

ENSAPLT00000028219

6062720 - 6293896

231177

ENSAPLT00000025876

6062720 - 6250077

187358