Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_12_61949_62040_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61949 - 62040

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAATACT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTAAC

U12 Branch Point Sequence:

CTTTTGCCATTT

Flanking Amino Acid:

LQHLLRDSHLKMLVKQEEQM

Intron Amino Acid Position:

196

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

0.9

79.5

33.4

Major BPS

66.8

0.42

1.2

69.6

35.5

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

37.9

-1.4

2.9

49.2

Minor BPS

37.8

-0.8

2.4

59.83

44.3

Associated Gene:

Gene:

ANKRD27

Ensembl Gene ID:

ENSAPLG00000011807

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012393

53478 - 88364

34887

ENSAPLT00000040364

49996 - 88364

38369

ENSAPLT00000033866

49668 - 88364

38697