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Intron Name: Anas_platyrhynchos_platyrhynchos_12_6220978_6227748_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6220978 - 6227748

Intron Length:

6771

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGATCA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

ATTCATGCAACC

Flanking Amino Acid:

VKQVEEIHNEVEFEWLRQFW

Intron Amino Acid Position:

383

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.8

76.5

27.7

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

93.2

0.97

0.6

88.8

20.4

Minor 5ss

32.8

-2

39.5

45.9

Minor BPS

43.5

-0.5

2.2

59.61

39.2

Associated Gene:

Gene:

FTO

Ensembl Gene ID:

ENSAPLG00000016324

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025876

6062720 - 6250077

187358

ENSAPLT00000040925

6133118 - 6253428

120311

ENSAPLT00000022550

6062720 - 6264570

201851

ENSAPLT00000038462

6126095 - 6293896

167802

ENSAPLT00000017031

6070831 - 6293896

223066

ENSAPLT00000031057

6126095 - 6247973

121879

ENSAPLT00000028219

6062720 - 6293896

231177

ENSAPLT00000048011

6120600 - 6293896

173297