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Intron Name: Anas_platyrhynchos_platyrhynchos_12_6227893_6229661_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6227893 - 6229661

Intron Length:

1769

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

TATATCTTTATAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTATTATAT

Flanking Amino Acid:

RFSSTHRVADCSRGTLEYIF

Intron Amino Acid Position:

335

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

89.1

24.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

79.1

0.65

0.8

73.3

36.7

Minor 5ss

41.7

-0.9

2.8

41.5

Minor BPS

57.2

0.3

1.9

82.2

38.8

Associated Gene:

Gene:

FTO

Ensembl Gene ID:

ENSAPLG00000016324

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028219

6062720 - 6293896

231177

ENSAPLT00000048011

6120600 - 6293896

173297

ENSAPLT00000025876

6062720 - 6250077

187358

ENSAPLT00000040925

6133118 - 6253428

120311

ENSAPLT00000022550

6062720 - 6264570

201851

ENSAPLT00000038462

6126095 - 6293896

167802

ENSAPLT00000017031

6070831 - 6293896

223066

ENSAPLT00000031057

6126095 - 6247973

121879