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Intron Name: Anas_platyrhynchos_platyrhynchos_12_6238735_6245516_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6238735 - 6245516

Intron Length:

6782

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTATCTTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TTTATCTTTATA

Flanking Amino Acid:

TVAVYSYSCEGSPAEETYDQ

Intron Amino Acid Position:

260

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.5

1.05

0.7

92.2

16.5

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

85.4

0.8

0.7

80.7

31.2

Minor 5ss

-2.1

2.8

41.5

45.1

Minor BPS

63.3

0.41

1.6

75.39

35.6

Associated Gene:

Gene:

FTO

Ensembl Gene ID:

ENSAPLG00000016324

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022550

6062720 - 6264570

201851

ENSAPLT00000038462

6126095 - 6293896

167802

ENSAPLT00000017031

6070831 - 6293896

223066

ENSAPLT00000031057

6126095 - 6247973

121879

ENSAPLT00000028219

6062720 - 6293896

231177

ENSAPLT00000048011

6120600 - 6293896

173297

ENSAPLT00000025876

6062720 - 6250077

187358

ENSAPLT00000040925

6133118 - 6253428

120311