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Intron Name: Anas_platyrhynchos_platyrhynchos_12_6241961_6245516_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6241961 - 6245516

Intron Length:

3556

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

GTTCTTGTTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAAAGAT

U12 Branch Point Sequence:

GATGACAGAATA

Flanking Amino Acid:

TVAVYSYSCEVL*

Intron Amino Acid Position:

260

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.5

1.05

0.7

92.2

16.5

Major BPS

48.9

-0

1.1

44.7

36.9

Major PPT

78.9

0.65

0.9

77.1

37.1

Minor 5ss

-2.1

2.8

41.5

45.1

Minor BPS

43.1

-0.5

1.9

52.66

38.7

Associated Gene:

Gene:

FTO

Ensembl Gene ID:

ENSAPLG00000016324

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030247

6240954 - 6293896

52943