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Intron Name: Anas_platyrhynchos_platyrhynchos_12_6246178_6253350_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6246178 - 6253350

Intron Length:

7173

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAACGTAT

5'SS Class:

major

3'SS Sequence:

TTTTCTCTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

GGAAAAATAATT

Flanking Amino Acid:

TPADADFHQLWKTKYSKLVF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.3

0.48

1.2

68.3

39.1

Major BPS

71.2

0.53

70.3

31.9

Major PPT

94.1

0.99

0.5

92.8

16.8

Minor 5ss

44.1

-0.6

3.3

60.9

46.1

Minor BPS

41.6

-0.5

1.9

55.31

39.4

Associated Gene:

Gene:

FTO

Ensembl Gene ID:

ENSAPLG00000016324

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030247

6240954 - 6293896

52943

ENSAPLT00000022550

6062720 - 6264570

201851

ENSAPLT00000048011

6120600 - 6293896

173297

ENSAPLT00000017031

6070831 - 6293896

223066

ENSAPLT00000040925

6133118 - 6253428

120311

ENSAPLT00000038462

6126095 - 6293896

167802