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Intron Name: Anas_platyrhynchos_platyrhynchos_12_6253429_6264115_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6253429 - 6264115

Intron Length:

10687

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTCAG

5'SS Class:

strong_major

3'SS Sequence:

TTCCCCAAAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TATTCCCCAAAA

Flanking Amino Acid:

MKKKLLEELGE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.9

70.6

41.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

64.2

0.32

59.5

34.5

Minor 5ss

33.7

-1.9

2.9

38.1

40.9

Minor BPS

53.8

0.12

71.73

39.4

Associated Gene:

Gene:

FTO

Ensembl Gene ID:

ENSAPLG00000016324

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022550

6062720 - 6264570

201851