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Intron Name: Anas_platyrhynchos_platyrhynchos_12_6296978_6297759_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6296978 - 6297759

Intron Length:

782

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTTTGTACC

5'SS Class:

major

3'SS Sequence:

TTGGTTTGGGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTTAT

U12 Branch Point Sequence:

GGTAACTTATTC

Flanking Amino Acid:

LTLVGIGGLHESTTQNVKAR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.3

0.43

1.2

65.3

38.4

Major BPS

74.8

0.62

0.9

63.7

35.1

Major PPT

63.3

0.3

1.1

61.8

44.4

Minor 5ss

39.6

-1.2

2.3

45.2

36.3

Minor BPS

48.3

-0.1

1.8

58.06

40.3

Associated Gene:

Gene:

RPGRIP1L

Ensembl Gene ID:

ENSAPLG00000016340

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046484

6295541 - 6368877

73337

ENSAPLT00000017057

6296886 - 6368877

71992

ENSAPLT00000017056

6295698 - 6366692

70995