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Intron Name: Anas_platyrhynchos_platyrhynchos_12_6305652_6311543_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6305652 - 6311543

Intron Length:

5892

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTATGA

5'SS Class:

major

3'SS Sequence:

TACAATTTTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

TTCTCTTTAATA

Flanking Amino Acid:

QLKEQETASQRLNIRDNVEM

Intron Amino Acid Position:

257

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

63.2

37.6

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

64.4

0.33

1.1

63.8

41.2

Minor 5ss

43.5

-0.7

2.8

47.1

Minor BPS

81.1

0.97

82.68

32.7

Associated Gene:

Gene:

RPGRIP1L

Ensembl Gene ID:

ENSAPLG00000016340

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046484

6295541 - 6368877

73337

ENSAPLT00000017057

6296886 - 6368877

71992

ENSAPLT00000017056

6295698 - 6366692

70995