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Intron Name: Anas_platyrhynchos_platyrhynchos_12_6317405_6321045_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6317405 - 6321045

Intron Length:

3641

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATATT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTGAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAC

U12 Branch Point Sequence:

TTTCTTTGAACA

Flanking Amino Acid:

LRENYDKLYNRQLTLGSASF

Intron Amino Acid Position:

366

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.96

0.8

93.3

21.1

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

0.65

76.9

Minor 5ss

-1

59.7

44.8

Minor BPS

66.9

0.53

1.4

77.33

32.8

Associated Gene:

Gene:

RPGRIP1L

Ensembl Gene ID:

ENSAPLG00000016340

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017056

6295698 - 6366692

70995