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Intron Name: Anas_platyrhynchos_platyrhynchos_12_6321630_6325424_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6321630 - 6325424

Intron Length:

3795

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACAATTC

5'SS Class:

major

3'SS Sequence:

TTCTCTATGTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

ATTTTGTTATTT

Flanking Amino Acid:

EILDKIKVERDQKEKLMQEN

Intron Amino Acid Position:

429

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.7

0.56

69.5

36.2

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

0.52

0.9

74.2

35.2

Minor 5ss

40.8

-1

3.4

59.1

45.6

Minor BPS

52.1

0.14

2.2

77.4

39.8

Associated Gene:

Gene:

RPGRIP1L

Ensembl Gene ID:

ENSAPLG00000016340

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046484

6295541 - 6368877

73337

ENSAPLT00000017057

6296886 - 6368877

71992

ENSAPLT00000017056

6295698 - 6366692

70995