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Intron Name: Anas_platyrhynchos_platyrhynchos_12_6325532_6325739_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6325532 - 6325739

Intron Length:

208

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAAATCT

5'SS Class:

major

3'SS Sequence:

ATTTCTGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTCATTGAGT

Flanking Amino Acid:

LKNHMKCLTKESDVDATELN

Intron Amino Acid Position:

465

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

0.9

73.6

30.9

Major BPS

100

1.24

0.5

100

Major PPT

83.9

0.76

0.9

81.3

35.7

Minor 5ss

34.5

-1.8

3.2

48.3

47.4

Minor BPS

66.5

0.6

1.9

88.62

36.3

Associated Gene:

Gene:

RPGRIP1L

Ensembl Gene ID:

ENSAPLG00000016340

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046484

6295541 - 6368877

73337

ENSAPLT00000017057

6296886 - 6368877

71992

ENSAPLT00000017056

6295698 - 6366692

70995