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Intron Name: Anas_platyrhynchos_platyrhynchos_12_6325791_6327005_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6325791 - 6327005

Intron Length:

1215

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTTAG

5'SS Class:

strong_major

3'SS Sequence:

AAATTTGCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

AACTTTTCAAAT

Flanking Amino Acid:

ELNEALLLIKVRKQQKNGDL

Intron Amino Acid Position:

482

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.75

1.1

74.9

38.1

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

69.1

0.43

59.2

46.2

Minor 5ss

45.1

-0.5

2.6

57.8

46.8

Minor BPS

49.8

0.07

1.6

64.57

39.8

Associated Gene:

Gene:

RPGRIP1L

Ensembl Gene ID:

ENSAPLG00000016340

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017056

6295698 - 6366692

70995