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Intron Name: Anas_platyrhynchos_platyrhynchos_12_6325791_6327017_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6325791 - 6327017

Intron Length:

1227

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTTAG

5'SS Class:

strong_major

3'SS Sequence:

GGTTCGAAAGCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

AACTTTTCAAAT

Flanking Amino Acid:

ELNEALLLIKQKNGDLMFLE

Intron Amino Acid Position:

466

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.75

1.1

74.9

38.1

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

55.4

0.12

1.1

49.1

42.9

Minor 5ss

45.1

-0.5

2.6

57.8

46.8

Minor BPS

49.8

0.07

1.6

64.57

39.8

Associated Gene:

Gene:

RPGRIP1L

Ensembl Gene ID:

ENSAPLG00000016340

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017057

6296886 - 6368877

71992