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Intron Name: Anas_platyrhynchos_platyrhynchos_12_6329393_6330016_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6329393 - 6330016

Intron Length:

624

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAATCAAC

5'SS Class:

major

3'SS Sequence:

ATTTATTCCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

ATATATTTATTC

Flanking Amino Acid:

GKIYSTAVLVGIKGNIQNYG

Intron Amino Acid Position:

732

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.1

66.9

38.4

Major BPS

88.7

0.96

0.8

36.5

Major PPT

76.2

0.59

0.8

74.6

35.3

Minor 5ss

39.9

-1.1

2.9

41.5

Minor BPS

50.9

0.01

1.7

62.44

37.1

Associated Gene:

Gene:

RPGRIP1L

Ensembl Gene ID:

ENSAPLG00000016340

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046484

6295541 - 6368877

73337

ENSAPLT00000017057

6296886 - 6368877

71992

ENSAPLT00000017056

6295698 - 6366692

70995