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Intron Name: Anas_platyrhynchos_platyrhynchos_12_6330169_6332448_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6330169 - 6332448

Intron Length:

2280

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TCATTTAAAGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATGTTTTTAATT

Flanking Amino Acid:

GFREHEQSSQQILRTAQVST

Intron Amino Acid Position:

783

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.95

0.8

85.8

25.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

67.3

0.39

64.2

40.3

Minor 5ss

49.9

-0

2.4

66.7

44.7

Minor BPS

73.6

0.82

1.1

81.25

Associated Gene:

Gene:

RPGRIP1L

Ensembl Gene ID:

ENSAPLG00000016340

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046484

6295541 - 6368877

73337

ENSAPLT00000017057

6296886 - 6368877

71992

ENSAPLT00000017056

6295698 - 6366692

70995